منابع مشابه
Sequanix: A Dynamic Graphical Interface for Snakemake Workflows.
Summary We designed a PyQt graphical user interface - Sequanix - aimed at democratizing the use of Snakemake pipelines in the NGS space and beyond. By default, Sequanix includes Sequana NGS pipelines (Snakemake format) (http://sequana.readthedocs.io), and is also capable of loading any external Snakemake pipeline. New users can easily, visually, edit configuration files of expert-validated pipe...
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Snakemake is a novel workflow engine with a simple Python-derived workflow definition language and an optimizing execution environment. It is the first system that supports multiple named wildcards (or variables) in input and output filenames of each rule definition. It also allows to write human-readable workflows that document themselves. We have found Snakemake especially useful for building...
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When considering the acquisition of experimental synchrotron radiation (SR) X-ray CT data, the reconstruction workflow cannot be limited to the essential computational steps of flat fielding and filtered back projection (FBP). More refined image processing is often required, usually to compensate artifacts and enhance the quality of the reconstructed images. In principle, it would be desirable ...
متن کاملDynamic Spatial Reasoning Capability in a Graphical Interface Evaluation Tool
This paper describes dynamic and spatial reasoning enhancements to the Graph-Based Interface Language tool (GRBIL), which creates ACT-R models by demonstration. A new ability for users to create monitors enables procedures to be dynamically triggered. A new integration of ACT-R with a diagrammatic reasoning theory allows ACT-R to perform spatial reasoning. Capabilities of the tool are demonstra...
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The Laplace/Poisson solver Relax3d has been used extensively in cyclotron central region design and other accelerator and beam physics applications. It is typically run in an interactive mode where the user types in commands and parameters to initiate and control the solution process and to view or output the results. This paper describes a graphical user interface (GUI) that eliminates most of...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2018
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/bty034